Modal analysis of novel coronavirus (SARS COV-2) using finite element methodology

Journal article


Warsame, C., Valerini, D., Llavori, I., Barber, A. and Goel, S. (2022). Modal analysis of novel coronavirus (SARS COV-2) using finite element methodology. Journal of the Mechanical Behavior of Biomedical Materials. 135, p. 105406. https://doi.org/10.1016/j.jmbbm.2022.105406
AuthorsWarsame, C., Valerini, D., Llavori, I., Barber, A. and Goel, S.
Abstract

Many new engineering and scientific innovations have been proposed to date to passivate the novel coronavirus (SARS CoV-2), with the aim of curing the related disease that is now recognised as COVID-19. Currently, vaccine development remains the most reliable solution available. Efforts to provide solutions as alternatives to vaccinations are growing and include established control of behaviours such as self-isolation, social distancing, employing facial masks and use of antimicrobial surfaces. The work here proposes a novel engineering method employing the concept of resonant frequencies to denature SARS CoV-2. Specifically, "modal analysis" is used to computationally analyse the Eigenvalues and Eigenvectors i.e. frequencies and mode shapes to denature COVID-19. An average virion dimension of 63 nm with spike proteins number 6, 7 and 8 were examined, which revealed a natural frequency of a single virus in the range of 88 to 125 MHz. The information derived about the natural frequency of the virus through this study will open newer ways to exploit medical solutions to combat future pandemics.

KeywordsCOVID-19
Year2022
JournalJournal of the Mechanical Behavior of Biomedical Materials
Journal citation135, p. 105406
PublisherElsevier
ISSN1751-6161
Digital Object Identifier (DOI)https://doi.org/10.1016/j.jmbbm.2022.105406
Publication dates
Print20 Aug 2022
Publication process dates
Accepted26 Jul 2022
Deposited28 Jul 2022
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Gehne, S., Benson, P., Koor, N., Dobson, K., Enfield, M. and Barber, A. (2019). Seismo‐Mechanical Response of Anisotropic Rocks Under Hydraulic Fracture Conditions: New Experimental Insights. Journal of Geophysical Research: Solid Earth. 124 (9), pp. 9562-9579. https://doi.org/10.1029/2019jb017342
Fabrication of functionalised surfaces on Gum metal (Ti-30Nb) using micromachining
Hawi, S., Dickins, A., Pardal, G.R., Giusca, C., Pearce, O. and Goel, S. (2019). Fabrication of functionalised surfaces on Gum metal (Ti-30Nb) using micromachining . euspen’s 19th International Conference & Exhibition, Bilbao, ES, June 2019. Bilbao 03 - 07 Jun 2019 EUSPEN.
Suppressing the Use of Critical Raw Materials in Joining of AISI 304 Stainless Steel Using Activated Tungsten Inert Gas Welding
Balos, S., Dramicanin, M., Janjatovic, P., Zabunov, I., Pilic, B., Goel, S. and Szutkowska, M. (2019). Suppressing the Use of Critical Raw Materials in Joining of AISI 304 Stainless Steel Using Activated Tungsten Inert Gas Welding. Metals. 9 (11), p. 1187. https://doi.org/https://doi.org/10.3390/met9111187
The role of high-pressure coolant in the wear characteristics of WC-Co tools during the cutting of Ti–6Al–4V
Stolf, P., Paiva, J.M., Ahmed, Y.S., Endrina, J.L., Goel, S. and Veldhuis, S.C. (2019). The role of high-pressure coolant in the wear characteristics of WC-Co tools during the cutting of Ti–6Al–4V. Wear. 440-441, p. 203090. https://doi.org/10.1016/j.wear.2019.203090
Structural orientation dependent sub-lamellar bone mechanics
Jimenez-Palomar, I, Shipov, A, Shahar, R and Barber, AH (2015). Structural orientation dependent sub-lamellar bone mechanics. Journal of the Mechanical Behavior of Biomedical Materials. 52, pp. 63-71. https://doi.org/10.1016/j.jmbbm.2015.02.031
Microscopy and supporting data for osteoblast integration within an electrospun fibrous network
Stachewicz, U, Qiao, T, Rawlinson, SCF, Veiga Almeida, F, Li, W-Q, Cattell, M and Barber, AH (2015). Microscopy and supporting data for osteoblast integration within an electrospun fibrous network. Data in Brief. 5, pp. 775-781. https://doi.org/10.1016/j.dib.2015.10.009
3D imaging of cell interactions with electrospun PLGA nanofiber membranes for bone regeneration
Stachewicz, U, Qiao, T, Rawlinson, SCF, Almeida, FV, Li, W-Q, Cattell, M and Barber, AH (2015). 3D imaging of cell interactions with electrospun PLGA nanofiber membranes for bone regeneration. Acta Biomaterialia. 27, pp. 88-100. https://doi.org/10.1016/j.actbio.2015.09.003
The cytolinker plectin regulates nuclear mechanotransduction in keratinocytes
Almeida, FV, Walko, G, McMillan, JR, McGrath, JA, Wiche, G, Barber, AH and Connelly, JT (2015). The cytolinker plectin regulates nuclear mechanotransduction in keratinocytes. Journal of Cell Science. 128 (24), pp. 4475-4486. https://doi.org/10.1242/jcs.173435
3D nanomechanical evaluations of dermal structures in skin
Kao, AP, Connelly, JT and Barber, AH (2015). 3D nanomechanical evaluations of dermal structures in skin. Journal of the Mechanical Behavior of Biomedical Materials. 57, pp. 14-23. https://doi.org/10.1016/j.jmbbm.2015.11.017
Nanointerfacial strength between non-collagenous protein and collagen fibrils in antler bone
Hang, F, Gupta, HS and Barber, AH (2013). Nanointerfacial strength between non-collagenous protein and collagen fibrils in antler bone. Journal of The Royal Society Interface. 11 (92), pp. 20130993-20130993. https://doi.org/10.1098/rsif.2013.0993
Adhesion Anisotropy between Contacting Electrospun Fibers
Stachewicz, U, Hang, F and Barber, AH (2014). Adhesion Anisotropy between Contacting Electrospun Fibers. Langmuir. 30 (23), pp. 6819-6825. https://doi.org/10.1021/la5004337
Polarised infrared microspectroscopy of edge-oriented graphene oxide papers
Frogley, MD, Wang, C, Cinque, G and Barber, AH (2014). Polarised infrared microspectroscopy of edge-oriented graphene oxide papers. Vibrational Spectroscopy. 75, pp. 178-183. https://doi.org/10.1016/j.vibspec.2014.07.005
Molecular force transfer mechanisms in graphene oxide paper evaluated using atomic force microscopy and in situ synchrotron micro FT-IR spectroscopy
Wang, C, Frogley, MD, Cinque, G, Liu, L-Q and Barber, AH (2014). Molecular force transfer mechanisms in graphene oxide paper evaluated using atomic force microscopy and in situ synchrotron micro FT-IR spectroscopy. Nanoscale. 6 (23), pp. 14404-14411. https://doi.org/10.1039/C4NR03646H
Mechanical Behavior of Osteoporotic Bone at Sub-Lamellar Length Scales
Jimenez-Palomar, I, Shipov, A, Shahar, R and Barber, AH (2015). Mechanical Behavior of Osteoporotic Bone at Sub-Lamellar Length Scales. Frontiers in Materials. 2. https://doi.org/10.3389/fmats.2015.00009
Extreme strength observed in limpet teeth
Barber, AH, Lu, D and Pugno, NM (2015). Extreme strength observed in limpet teeth. Journal of The Royal Society Interface. 12 (105), pp. 20141326-20141326. https://doi.org/10.1098/rsif.2014.1326
Wetting Hierarchy in Oleophobic 3D Electrospun Nanofiber Networks
Stachewicz, U, Bailey, RJ, Zhang, H, Stone, CA, Willis, CR and Barber, AH (2015). Wetting Hierarchy in Oleophobic 3D Electrospun Nanofiber Networks. ACS applied materials & interfaces. 7 (30), pp. 16645-16652. https://doi.org/10.1021/acsami.5b04272
Molecular dynamics simulation of the elliptical vibration assisted machining (EVAM) of pure iron
Goel S, Martinez FD, Chavoshi SZ, Khatri N and Giusca C (2018). Molecular dynamics simulation of the elliptical vibration assisted machining (EVAM) of pure iron. Journal of Micromanufacturing. 1 (1), pp. 6-19. https://doi.org/10.1177/2516598418765359
The possibility of performing FEA analysis of a contact loading process fed by the MD simulation data
Goel S, Iñigo Llavori AZ, Giusca C, Veldhuis SC and Endrino JL (2018). The possibility of performing FEA analysis of a contact loading process fed by the MD simulation data. International Journal of Machine Tools and Manufacture. 134, pp. 79-80. https://doi.org/10.1016/j.ijmachtools.2018.07.003
Incipient plasticity in tungsten during nanoindentation: Dependence on surface roughness, probe radius and crystal orientation
Beake B and Goel, S. (2018). Incipient plasticity in tungsten during nanoindentation: Dependence on surface roughness, probe radius and crystal orientation. International Journal of Refractory Metals and Hard Materials. 75, pp. 63-69. https://doi.org/https://doi.org/10.1016/j.ijrmhm.2018.03.020
Designing nanoindentation simulation studies by appropriate indenter choices: Case study on single crystal tungsten
Goel, S., Cross, G., Stukowski, A., Gamsjager, E., Beake, B. and Agrawal, A. (2018). Designing nanoindentation simulation studies by appropriate indenter choices: Case study on single crystal tungsten. Computational Materials Science. 152, pp. 196-210. https://doi.org/https://doi.org/10.1016/j.commatsci.2018.04.044
Hydration dependent mechanical performance of denture adhesive hydrogels
Zhang, F, An, Y, Roohpour, N, Barber, AH and Gautrot, JE (2018). Hydration dependent mechanical performance of denture adhesive hydrogels. Dental Materials. 34 (10), pp. 1440-1448. https://doi.org/10.1016/j.dental.2018.06.015
Approaches to 3D printing teeth from X-ray microtomography.
Cresswell-Boyes, AJ, Barber, AH, Mills, D, Tatla, A and Davis, GR (2018). Approaches to 3D printing teeth from X-ray microtomography. Journal of Microscopy. 272 (3), pp. 207-212. https://doi.org/10.1111/jmi.12725
Optimization of digital volume correlation computation in SR-microCT images of trabecular bone and bone-biomaterial systems.
Peña Fernández, M, Barber, AH, Blunn, GW and Tozzi, G (2018). Optimization of digital volume correlation computation in SR-microCT images of trabecular bone and bone-biomaterial systems. Journal of Microscopy. 272 (3), pp. 213-272. https://doi.org/10.1111/jmi.12745
Development of sustainable biodegradable lignocellulosic hemp fiber/ polycaprolactone biocomposites for light weight applications
Barber, AH, Dhakal, HN, Ismail, S, Zhang, Z, Welsh, E, Maigret, J-E and Beaugrand, J (2018). Development of sustainable biodegradable lignocellulosic hemp fiber/ polycaprolactone biocomposites for light weight applications. Composites Part A: Applied Science and Manufacturing. 113, pp. 350-358. https://doi.org/10.1016/j.compositesa.2018.08.005
Preservation of bone tissue integrity with temperature control for in situ SR-MicroCT experiments
Fernández, MP, Dall'Ara, E, Kao, AP, Bodey, AJ, Karali, A, Blunn, GW, Barber, AH and Tozzi, G (2018). Preservation of bone tissue integrity with temperature control for in situ SR-MicroCT experiments. Materials. 11 (11). https://doi.org/10.3390/ma11112155
Effect of SR-microCT radiation on the mechanical integrity of trabecular bone using in situ mechanical testing and digital volume correlation
Peña Fernández, M, Cipiccia, S, Dall'Ara, E, Bodey, AJ, Parwani, R, Pani, M, Blunn, GW, Barber, AH and Tozzi, G (2018). Effect of SR-microCT radiation on the mechanical integrity of trabecular bone using in situ mechanical testing and digital volume correlation. Journal of the Mechanical Behavior of Biomedical Materials. 88, pp. 109-119. https://doi.org/10.1016/j.jmbbm.2018.08.012
Current trends and future of sequential micro-machining processes on a single machine tool
Chavoshi, S.Z., Goel, S. and Morantz, P. (2017). Current trends and future of sequential micro-machining processes on a single machine tool. Materials & Design. 127, pp. 37-53. https://doi.org/10.1016/j.matdes.2017.04.057
Cyclic nanoindentation and nano-impact fatigue mechanisms of functionally graded TiN/TiNi film
Faisal NH, Prathuru AK, Goel S, Ahmed R, Droubi MG, Beake BD and Fu YQ (2017). Cyclic nanoindentation and nano-impact fatigue mechanisms of functionally graded TiN/TiNi film. Shape Memory and Superelasticity. 3, pp. 149-167. https://doi.org/10.1007/s40830-017-0099-y
Addressing the discrepancy of finding equilibrium melting point of silicon using MD simulations
Chavoshi SZ, Xu S and Goel S (2017). Addressing the discrepancy of finding equilibrium melting point of silicon using MD simulations. Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences. https://doi.org/10.1098/rspa.2017.0084
Micro-mechanical properties of the tendon-to-bone attachment
Deymier, AC, An, Y, Boyle, JJ, Schwartz, AG, Birman, V, Genin, GM, Thomopoulos, S and Barber, AH (2017). Micro-mechanical properties of the tendon-to-bone attachment. Acta Biomaterialia. 56, pp. 25-35. https://doi.org/10.1016/j.actbio.2017.01.037
Surface free energy analysis of electrospun fibers based on Rayleigh-Plateau/Weber instabilities
Stachewicz, U, Dijksman, JF, Soudani, C, Tunnicliffe, LB, Busfield, JJC and Barber, AH (2017). Surface free energy analysis of electrospun fibers based on Rayleigh-Plateau/Weber instabilities. European Polymer Journal. 91, pp. 368-375. https://doi.org/10.1016/j.eurpolymj.2017.04.017
Extreme Toughness Exhibited in Electrospun Polystyrene Fibers
Zhang, F and Barber, AH (2017). Extreme Toughness Exhibited in Electrospun Polystyrene Fibers. Macromolecular Materials and Engineering. 302 (9), pp. 1700084-1700084. https://doi.org/10.1002/mame.201700084
X-ray Imaging of Transplanar Liquid Transport Mechanisms in Single Layer Textiles
Zhang, G, Parwani, R, Stone, CA, Barber, AH and Botto, L (2017). X-ray Imaging of Transplanar Liquid Transport Mechanisms in Single Layer Textiles. Langmuir. 33 (43), pp. 12072-12079. https://doi.org/10.1021/acs.langmuir.7b02982
Stress concentrations in nanoscale defective graphene
Wang, C, Wang, J and Barber, AH (2017). Stress concentrations in nanoscale defective graphene. AIP Advances. 7 (11), pp. 115001-115001. https://doi.org/10.1063/1.4996387
Influence of temperature on the anisotropic cutting behaviour of single crystal silicon: A molecular dynamics simulation investigation
Chavoshi, S.Z., Goel, S. and Luo, X. (2016). Influence of temperature on the anisotropic cutting behaviour of single crystal silicon: A molecular dynamics simulation investigation. Journal of Manufacturing Processes. 23, pp. 201-210. https://doi.org/10.1016/j.jmapro.2016.06.009
Advances in the surface defect machining (SDM) of hard steels
Rashid, W.B. and Goel, S. (2016). Advances in the surface defect machining (SDM) of hard steels. Journal of Manufacturing Processes. 23, pp. 37-46. https://doi.org/10.1016/j.jmapro.2016.05.007
Influence of microstructure on the cutting behaviour of silicon
Goel, S., Kovalchenko, A., Stukowski, A. and Cross, G. (2016). Influence of microstructure on the cutting behaviour of silicon. Acta Materialia. 105, pp. 464-478. https://doi.org/10.1016/j.actamat.2015.11.046
Type VI Collagen Regulates Dermal Matrix Assembly and Fibroblast Motility
Theocharidis, G, Drymoussi, Z, Kao, AP, Barber, AH, Lee, DA, Braun, KM and Connelly, JT (2016). Type VI Collagen Regulates Dermal Matrix Assembly and Fibroblast Motility. Journal of Investigative Dermatology. 136 (1), pp. 74-83. https://doi.org/10.1038/JID.2015.352
Evaluation of bioprosthetic heart valve failure using a matrix-fibril shear stress transfer approach
Anssari-Benam, A, Barber, AH and Bucchi, A (2016). Evaluation of bioprosthetic heart valve failure using a matrix-fibril shear stress transfer approach. Journal of Materials Science: Materials in Medicine. 27 (2). https://doi.org/10.1007/s10856-015-5657-2
Failure mechanisms in denture adhesives
An, Y, Li, D, Roohpour, N, Gautrot, JE and Barber, AH (2016). Failure mechanisms in denture adhesives. Dental Materials. 32 (5), pp. 615-623. https://doi.org/10.1016/j.dental.2016.01.007
Morphological and Mechanical Biomimetic Bone Structures
Parwani, R, Curto, M, Kao, AP, Rowley, PJ, Pani, M, Tozzi, G and Barber, AH (2016). Morphological and Mechanical Biomimetic Bone Structures. ACS Biomaterials Science & Engineering. 3 (11), pp. 2761-2767. https://doi.org/10.1021/acsbiomaterials.6b00652